Epigenetics Protocols Database
The following protocols are selected, solicited and reviewed annually by Epigenome Network of Excellence members and are supplied with reviewer comments. They are specific and cutting-edge protocols designed especially for epigenetic research. Comments and questions are always encouraged.
  Id | Title |
|---|---|
| PROT29 | In vivo dual cross-linking chromatin immunoprecipitation: detecting chromatin proteins not directly bound to DNA Antonio Porro and Giovanni Perini - University of Bologna, Bologna Contact: [email protected] Reviewed by: Bernd Schuettengruber, Cavalli Lab, Institute of Human Genetics, CNRS, Montpellier, France |
| PROT35 | Bisulfite sequencing of small DNA/cell samples Sascha Tierling, Sabine Reither, Jörn Walter - Saarland University, Saarbrücken Contact: [email protected] Reviewed by: Jörg Tost Centre National de Génotypage, CEA / Institut de Génomique, 91057 Evry Cedex, France. |
| PROT37 | Bisulfite sequencing of very small samples Petr Svoboda - Institute of Molecular Genetics, Prague Contact: [email protected] Reviewed by: Jörn E. Walter, Saarland University, Postbox 151150, 66041 Saarbrücken, Germany, [email protected] |
| PROT26 | Carrier ChIP (CChIP) Laura O’Neill & Bryan Turner - University of Birmingham, Birmingham Contact: [email protected] Reviewed by: |
| PROT11 | Chromatin Immunoprecipitation (ChIP) Assay Antigone Kouskouti & Irene Kyrmizi - Talianidis Lab, Heraklion Contact: [email protected] Reviewed by: Sergei Denisov and Arjen Brinkmann, Stunnenberg lab, Amsterdam |
| PROT22 | Chromatin immunoprecipitation on native chromatin from cells and tissues David Umlauf, Yuji Goto, Katia Delaval, Alexandre Wagschal, Philippe Arnaud & Robert Feil - Institute of Molecular Genetics, Montpellier Contact: [email protected] Reviewed by: Annabelle Lewis, The Babraham Institute, Cambridge, UK. |
| PROT27 | Chromatin immunoprecipitation protocol for Saccharomyces cerevisiae Haico van Attikum & Jennifer Cobb - Friedrich Miescher Institute for Biomedical Research, Basel Contact: [email protected] Reviewed by: Xuetong (Snow) Shen, Department of Carcinogenesis, UTMDACC - Science Park Research Division, Smithville, TX 78957. |
| PROT03 | Chromatin Immunoprecipitation Protocol for Histone Modification & Chromatin Associated Proteins Roderick O'Sullivan & Joost Martens - Jenuwein Lab, Vienna Contact: [email protected] Reviewed by: Antigone Kouskouti and Irene Kyrmizi, Talianidis Lab, Herakleion. See also their alternative ChIP protocol. |
| PROT12 | Chromatin Immunoprecipitation Protocol to Analyze Histone Modifications in Arabidopsis thaliana Werner Aufsatz - Gregor Mendel Institute of Molecular Plant Biology, Vienna Contact: [email protected] Reviewed by: Olivier Mathieu, Paszkowski lab, Genève |
| PROT05 | Chromosome Conformation Capture (3C) Alice Horton & Peter Fraser - Laboratory of Chromatin and Gene Expression, Cambridge Contact: [email protected] Reviewed by: Job Dekker, University of Massachusetts Medical School, Worcester |
